I love that one of the questions TMA asks is “can you condemn someone for making decisions based on incomplete information?”.
Gertrude thought she was saving the world by sacrificing her assistants. Martin thought he was doing the right thing by not killing Jonah. Georgie thought she was doing the right thing by cutting ties with Jon. Basira let herself be manipulated by Elias because she wanted to save the world. And Jon, oh Jon, making imperfect choices based on imperfect knowledge every step of the way.
This is a recurring theme even beyond morality. Flawed rituals, incomplete understanding of the Entities, people and things that once were people running around making plans and trying to understand. They don’t have the full picture. Many of them have entirely different pictures.
Our world is full of choices, and very rarely do we truly know what any of them mean. But we make them nonetheless.